Cui, Jiaxin: Biosynthesis and biotechnological application of the glycine-glucolipid from the marine bacterium Alcanivorax borkumensis. - Bonn, 2024. - Dissertation, Rheinische Friedrich-Wilhelms-Universität Bonn.
Online-Ausgabe in bonndoc: https://nbn-resolving.org/urn:nbn:de:hbz:5-79796
Online-Ausgabe in bonndoc: https://nbn-resolving.org/urn:nbn:de:hbz:5-79796
@phdthesis{handle:20.500.11811/12646,
urn: https://nbn-resolving.org/urn:nbn:de:hbz:5-79796,
author = {{Jiaxin Cui}},
title = {Biosynthesis and biotechnological application of the glycine-glucolipid from the marine bacterium Alcanivorax borkumensis},
school = {Rheinische Friedrich-Wilhelms-Universität Bonn},
year = 2024,
month = dec,
note = {This study investigated the production, biosynthesis pathway, and physiological function of the glycine-glucolipid produced by the marine bacterium Alcanivorax borkumensis. An absolute quantification method using HPLC was developed, which involves converting the glycine-glucolipid to phenacyl esters, followed by measurement with HPLC with UV detection. Different molecular species were separated by HPLC and identified via mass spectrometry (MS) as glucosyl-tetra(3-hydroxy-acyl)-glycine, containing varying numbers of 3-hydroxy-decanoic acid or 3-hydroxy-octanoic acid groups. HPLC and MS results show that the glycine-glucolipid accumulates in cells, it is not secreted into the medium, and its production is correlated with the alkane degradation process, rather than a response to phosphate deprivation.
The deletion mutations in A. borkumensis and expression studies in E. coli demonstrate that the glycine-glucolipid is produced in A. borkumensis via a non-ribosomal peptide synthetase (NRPS)-dependent pathway involving the enzymes ABO_1784 (GglsA, NRPS), ABO_1783 (GglsB, glycosyltransferase), and ABO_1782 (GglsC, phosphopantetheinyl transferase, PPTase). GglsC activates GglsA through phosphopantetheinylation on the Ser1039 of the thiolation (T) domain. The adenylation (A) domain of GglsA activates and transfers a glycine onto the phosphopantetheine arm tethered to the T domain, consuming ATP in this process. The condensation (C) domain of GglsA catalyzes the condensation reaction, transferring a 3-D-hydroxydecanoyl moiety from 3-D-hydroxydecanoyl-CoA, forming an amide bond between glycine's amino group and the acyl group of the 3-D-hydroxydecanoyl moiety. GglsA subsequently attaches three additional 3-D-hydroxydecanoyl moieties onto the hydroxy groups of the intermediate on the T domain. Finally, the T domain shuttles the aglycone from the C/T surface to the T/TE globular core, where the aglycone is hydrolyzed from GglsA by the thioesterase (TE) domain at catalytic site Ser1177. The aglycone released from GglsA is then glycosylated by GglsB using UDP-glucose as a substrate.
Physiological experiments, including the bacterial adhesion to hydrocarbons (BATH) assay, hexadecane emulsification, and observation via confocal microscopy, were performed with ΔgglsB and ΔgglsA mutants grown in pyruvate or hexadecane-containing medium. The hexadecane-grown mutant cells lacking the glycine-glucolipid and pyruvate-grown cells showed reduced adhesion to hexadecane and poorer emulsification efficiency compared to hexadecane-grown wild-type cells. The absence of the glycine-glucolipid not only impacted the attachment to hexadecane, but also reduced growth on hexadecane medium, decreased storage lipid accumulation, and resulted in smaller cell size.
Expression of GglsA in E. coli severely limits growth and glycine-glucolipid production. Thus, A. borkumensis is required for glycine-glucolipid production. However, A. borkumensis can only be grown with expensive carbon sources. Alternatively, co-cultivation with hydrocarbon-producing cyanobacteria could offer a more sustainable approach for cultivating A. borkumensis. These cyanobacteria produce hydrocarbons through photosynthesis using CO2 and sunlight, and the insoluble carbon produced could stimulate glycine-glucolipid production in A. borkumensis. The glycine-glucolipid can potentially be employed as a biosurfactant in agriculture, replacing ecotoxic chemical surfactants like Triton X-100. However, its high cost currently limits widespread agricultural application despite its environmental benefits.},
url = {https://hdl.handle.net/20.500.11811/12646}
}
urn: https://nbn-resolving.org/urn:nbn:de:hbz:5-79796,
author = {{Jiaxin Cui}},
title = {Biosynthesis and biotechnological application of the glycine-glucolipid from the marine bacterium Alcanivorax borkumensis},
school = {Rheinische Friedrich-Wilhelms-Universität Bonn},
year = 2024,
month = dec,
note = {This study investigated the production, biosynthesis pathway, and physiological function of the glycine-glucolipid produced by the marine bacterium Alcanivorax borkumensis. An absolute quantification method using HPLC was developed, which involves converting the glycine-glucolipid to phenacyl esters, followed by measurement with HPLC with UV detection. Different molecular species were separated by HPLC and identified via mass spectrometry (MS) as glucosyl-tetra(3-hydroxy-acyl)-glycine, containing varying numbers of 3-hydroxy-decanoic acid or 3-hydroxy-octanoic acid groups. HPLC and MS results show that the glycine-glucolipid accumulates in cells, it is not secreted into the medium, and its production is correlated with the alkane degradation process, rather than a response to phosphate deprivation.
The deletion mutations in A. borkumensis and expression studies in E. coli demonstrate that the glycine-glucolipid is produced in A. borkumensis via a non-ribosomal peptide synthetase (NRPS)-dependent pathway involving the enzymes ABO_1784 (GglsA, NRPS), ABO_1783 (GglsB, glycosyltransferase), and ABO_1782 (GglsC, phosphopantetheinyl transferase, PPTase). GglsC activates GglsA through phosphopantetheinylation on the Ser1039 of the thiolation (T) domain. The adenylation (A) domain of GglsA activates and transfers a glycine onto the phosphopantetheine arm tethered to the T domain, consuming ATP in this process. The condensation (C) domain of GglsA catalyzes the condensation reaction, transferring a 3-D-hydroxydecanoyl moiety from 3-D-hydroxydecanoyl-CoA, forming an amide bond between glycine's amino group and the acyl group of the 3-D-hydroxydecanoyl moiety. GglsA subsequently attaches three additional 3-D-hydroxydecanoyl moieties onto the hydroxy groups of the intermediate on the T domain. Finally, the T domain shuttles the aglycone from the C/T surface to the T/TE globular core, where the aglycone is hydrolyzed from GglsA by the thioesterase (TE) domain at catalytic site Ser1177. The aglycone released from GglsA is then glycosylated by GglsB using UDP-glucose as a substrate.
Physiological experiments, including the bacterial adhesion to hydrocarbons (BATH) assay, hexadecane emulsification, and observation via confocal microscopy, were performed with ΔgglsB and ΔgglsA mutants grown in pyruvate or hexadecane-containing medium. The hexadecane-grown mutant cells lacking the glycine-glucolipid and pyruvate-grown cells showed reduced adhesion to hexadecane and poorer emulsification efficiency compared to hexadecane-grown wild-type cells. The absence of the glycine-glucolipid not only impacted the attachment to hexadecane, but also reduced growth on hexadecane medium, decreased storage lipid accumulation, and resulted in smaller cell size.
Expression of GglsA in E. coli severely limits growth and glycine-glucolipid production. Thus, A. borkumensis is required for glycine-glucolipid production. However, A. borkumensis can only be grown with expensive carbon sources. Alternatively, co-cultivation with hydrocarbon-producing cyanobacteria could offer a more sustainable approach for cultivating A. borkumensis. These cyanobacteria produce hydrocarbons through photosynthesis using CO2 and sunlight, and the insoluble carbon produced could stimulate glycine-glucolipid production in A. borkumensis. The glycine-glucolipid can potentially be employed as a biosurfactant in agriculture, replacing ecotoxic chemical surfactants like Triton X-100. However, its high cost currently limits widespread agricultural application despite its environmental benefits.},
url = {https://hdl.handle.net/20.500.11811/12646}
}





